Image Analysis Scientist in US-Remote

Title: Image Analysis Scientist III

Purpose:

• The Precision Medicine Pathology team drives the scientific strategy for translational tissue-based biomarker development & discovery target validation/MOA projects, leads pathology collaborative programs, conducts histopathological evaluation & analysis of IHC & spatial biology technologies, and provides technical/scientific leadership to histotechnicians & pathology scientists.
• The successful candidate will have advanced knowledge and extended experience in analysis of high-plex images generated on the Akoya PhenoCycler Fusion platform.

Responsibilities:

• Implementation of different scripts and pipelines for analysis of high-plex PhenoCycler Fusion (CODEX) images.
• Independently performing end-to-end high-plex image analysis (tissue classification, cell segmentation, detection of marker positivity, cell phenotyping, unsupervised clustering, neighborhood analysis, proximity analysis).
• Acting as a subject matter resource and training other team members in high-plex image analysis tasks.
• Collaborating with pathologists and digital pathology scientists to support image analysis projects.
• Presenting the results and findings from spatial proteomics studies to stakeholders.

Qualifications:

• MSc, PhD, or equivalent degree in biological sciences/engineering/computer science/informatics
• Fluency in Python and R Studio
• Experience Level = 5-7 Years
• Experience in implementing and utilizing open-source scripts and pipelines for high-plex image analysis
• Experience in quantitative digital pathology analysis platforms such as Halo, Visiopharm, QuPath
• Close familiarity with tissue microscopic anatomy and histology (normal and diseased) is a plus
• Excellent verbal communication skills are required including the demonstrated ability to effectively and clearly summarize results for presentation and report generation
• Strong motivation, attention to detail, ability to think independently and fully integrate into a high achieving team environment
• Ability to multi-task and manage multiple projects

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